P elements containing a 7 kb DNA fragment from the middle of the Drosophila
bithorax complex insert preferentially into the bithorax complex or into t
he adjacent chromosome regions. This 'homing' property is similar to that r
eported for the engrailed promoter (Hama, C., All, Z. and Kornberg, T. B. (
1990) Genes Dev. 4, 1079-1093). The 7 kb fragment does not contain any know
n promoter, but it acts as a boundary element separating adjacent segmental
domains. An enhancer-trap P element was constructed with the homing fragme
nt and the selectable marker flanked by FRT sites. P insertions can be trim
med down by Flp-mediated recombination to just the lacZ reporter, so that t
he beta-galactosidase pattern is not influenced by sequences inside the P e
lement. Twenty insertions into the bithorax complex express beta-galactosid
ase in segmentally limited patterns, reflecting the segmental domains of th
e bithorax complex where the elements reside. The mapping of segmental doma
ins has now been revised, with enlargement of the abx/bx, bxd/pbx, and the
iab-3 domains. The FRT sites in the P elements permit recombination between
pairs of elements on opposite chromosomes, to generate duplications or del
etions of the DNA between the two insertion sites. Using this technique, th
e length of the Ultrabithorax transcription unit was varied from 37 to 138
kb, but there was surprisingly little effect on Ultrabithorax function.