During a 1995 austral spring cruise, a complex biomass was encountered near
South Orkney Island that ranged from a low-biomass, Chaetoceros tortissimu
s assemblage south of the front towards the ice edge, to a high-biomass, Th
alassiosira gravida-dominated assemblage at the northern edge. The maximum
levels of chlorophyll (Chl) a (up to 6 mg m(-3)) were higher than those obs
erved in previous high-performance liquid chromatography-based studies of p
igments in the pelagic Southern Ocean. The non-photosynthetic pigment chlor
ophyllide a comprised up to 75% of the chlorophyllous pigments in the south
ern assemblage, but < 5% in the northern assemblage. Concentrations of the
xanthophylls diadinoxanthin (DD) and diatoxanthin (DT), used as indicators
of mean irradiance, indicated low-light-adapted populations. Low-light DD DT/Chl a ratios in surface waters indicated that vertical mixing limited p
hytoplankton residence time in the near-surface layer, and thus limited exp
osure to maximum irradiance. Deck incubations of natural assemblages indica
ted that the dark epoxidation reaction (i.e. the return of DT to DD) was a
two-step reaction with the initial rate being more rapid (t(1/2) = 9.5 min)
than the second (t(1/2) = 55 min). Fucoxanthin, a major diatom pigment, wa
s more stable chemically in the water column than Chi a, and the vertical p
rofiles of fucoxanthin followed those of chlorophyllide a in some cases. Th
e formation and apparent stability of chlorophyllide a and fucoxanthin are
important considerations when estimating photosynthetically active biomass
over large regions of the ocean.