K. Hotta et al., Catalysis of decarboxylation by a preorganized heterogeneous microenvironment: Crystal structures of abzyme 21D8, J MOL BIOL, 302(5), 2000, pp. 1213-1225
Antibody 21D8 catalyzes the solvent-sensitive decarboxylation of 3-carboxyb
enzisoxazoles. The crystal structure of chimeric Fab 21D8 with and without
hapten at 1.61 Angstrom and 2.10 Angstrom, respectively, together with comp
utational analysis, shows how a melange of polar and non-polar sites are ex
ploited to achieve both substrate binding and acceleration of a reaction no
rmally facilitated by purely aprotic dipolar media. The striking similarity
of the decarboxylase and a series of unrelated esterase antibodies also hi
ghlights the chemical versatility of structurally conserved anion binding s
ites and the relatively subtle changes involved in fine-tuning the immunogl
obulin pocket for recognition of different ligands and catalysis of differe
nt reactions. (C) 2000 Academic Press.