The diagnosis of lung cancer is quite often hampered by the existence of va
rious cell types within samples such as biopsies or pleural effusions. We h
ave established a new marker for image cytometry of interphase tumor cells
of the lung by using the most recurrent and early cytogenetic event in lung
cancer, the loss of the short arm of chromosome 3. The method is based on
the detection of the imbalance between the long and the short arms of chrom
osome 3 by performing two-color fluorescence in situ hybridization on both
arms. Fourteen tumors were analyzed after short-term culture and compared w
ith the corresponding cytogenetic data obtained from metaphase analysis. Re
sults on interphase nuclei and control experiments on metaphases were the s
ame, with imbalance ratios ranging from 1.0 to 2.0 (mean value 1.6, median
1.5). To assess the clinical significance of this approach, three pleural e
ffusions were analyzed. Data showed that normal cells within the sample cou
ld have been distinguished from the tumor cells based on different imbalanc
e values between the long and the short arms. Thus, our method allows refin
ed detection of lung tumor cells within samples containing heterogeneous ce
ll populations.