The BTB/POZ (BTB) domain is an approximately 120 residue sequence that is c
onserved at the N-terminus of many proteins in both vertebrates and inverte
brates. We found that the protein encoded by a lethal allele of the Drosoph
ila modifier of mdg4 [mod(mdg4)] gene has two mutated residues in its BTB d
omain. The identities of the residues at the positions of these mutations a
re highly conserved in the BTB domain family of proteins, and when the corr
esponding mutations were engineered into the BTB domain-containing GAGA pro
tein, the activity of GAGA as a transcription activator in a transient tran
sfection assay was severely reduced. The functional equivalence of the BTB
domains was established by showing that the BTB domain of the mod(mdg4) pro
tein can effectively substitute for that of GAGA.