Complete mitochondrial DNA sequence of the Japanese sardine Sardinops melanostictus

Citation
Jg. Inoue et al., Complete mitochondrial DNA sequence of the Japanese sardine Sardinops melanostictus, FISHERIES S, 66(5), 2000, pp. 924-932
Citations number
41
Categorie Soggetti
Aquatic Sciences
Journal title
FISHERIES SCIENCE
ISSN journal
09199268 → ACNP
Volume
66
Issue
5
Year of publication
2000
Pages
924 - 932
Database
ISI
SICI code
0919-9268(200010)66:5<924:CMDSOT>2.0.ZU;2-P
Abstract
We determined the complete nucleotide sequence of the mitochondrial genome for a Japanese sardine, Sardinops melanostictus (Teleostei: Clupeiformes). The entire genome was purified by gene amplification using long polymerase chain reactions (PCR), and the products were subsequently used as templates for PCR with 30 sets of fish-versatile primers (including three species-sp ecific primers) that amplify contiguous, overlapping segments of the entire genome. Direct sequencing of the PCR products demonstrated that the genome [16881 base pairs (bp)] contained the same 37 mitochondrial structural gen es (two ribosomal RNA, 22 transfer RNA, and 13 protein-coding genes) as fou nd in other vertebrates, with the gene order identical to that in typical v ertebrates. A major non-coding region between the tRNA(Pro) and tRNA(Phe) g enes (1200 bp) was considered as the control (D-loop) region, as it has sev eral conservative blocks characteristic to this region.