Control of the permeability to oxygen is critical for the function of symbi
otic nitrogen fixation in legume nodules. The inner cortex (IC) seems to be
a primary site for this regulation. In alfalfa (Medicago sativa) nodules,
expression of the Msca1 gene encoding a carbonic anhydrase (CA) was previou
sly found to be restricted to the IC. We have now raised antibodies against
recombinant Msca1 protein and used them, together with antibodies raised a
gainst potato leaf CA, to demonstrate the presence of two forms of CA in ma
ture nodules. Each antibody recognizes a different CA isoform in nodule tis
sues. Immunolocalization revealed that leaf-related CAs were localized prim
arily in the nitrogen-fixing zone, whereas the Msca1 protein was restricted
exclusively to the IC region, in indeterminate and determinate nodules. In
alfalfa nodules grown at various O-2 concentrations, an inverse correlatio
n was observed between the external oxygen pressure and Msca1 protein conte
nt in the IC, the site of the putative diffusion barrier. Thus Msca1 is a m
olecular target of physiological processes occurring: in the IC cells invol
ved in gas exchange in the nodule.