Molecular computing, bounded nondeterminism, and efficient recursion

Authors
Citation
R. Beigel et B. Fu, Molecular computing, bounded nondeterminism, and efficient recursion, ALGORITHMIC, 25(2-3), 1999, pp. 222-238
Citations number
38
Categorie Soggetti
Engineering Mathematics
Journal title
ALGORITHMICA
ISSN journal
01784617 → ACNP
Volume
25
Issue
2-3
Year of publication
1999
Pages
222 - 238
Database
ISI
SICI code
0178-4617(199910/11)25:2-3<222:MCBNAE>2.0.ZU;2-M
Abstract
The maximum number of strands used is an important measure of a molecular a lgorithm's complexity. This measure is also called the volume used by the a lgorithm. Every problem that can be solved by an NP Turing machine with b(n ) binary nondeterministic choices can be solved by molecular computation in a polynomial number of steps, with four test tubes, in volume 2(b(n)). We identify a large class of recursive algorithms that can be implemented usin g bounded nondeterminism. This yields improved molecular algorithms for imp ortant problems like 3-SAT, independent set, and 3-colorability.