Telomeres, the eukaryotic chromosome termini, are deoxyribonucleoprotein st
ructures that distinguish natural chromosome ends from broken DNA. In most
organisms, telomeres are extended by a reverse transcriptase (RT) with an i
ntegrated RNA template, telomerase; in Drosophila melanogaster, however, te
lomere-specific retrotransposons, HeT-A and TART, transpose specifically to
chromosome ends. Whether telomeres are extended by a telomerase or by retr
otransposons, an RT is a key component. RT has been studied extensively, bo
th for its important role in converting RNA genomes to DNA, which has great
evolutionary impact, and as a therapeutic target in human retroviral disea
ses. Here we discuss a few important aspects of RT usage during retrotransp
osition and telomere elongation.