Characterization of the human nebulette gene: a polymorphism in an actin-binding motif is associated with nonfamilial idiopathic dilated cardiomyopathy

Citation
T. Arimura et al., Characterization of the human nebulette gene: a polymorphism in an actin-binding motif is associated with nonfamilial idiopathic dilated cardiomyopathy, HUM GENET, 107(5), 2000, pp. 440-451
Citations number
53
Categorie Soggetti
Molecular Biology & Genetics
Journal title
HUMAN GENETICS
ISSN journal
03406717 → ACNP
Volume
107
Issue
5
Year of publication
2000
Pages
440 - 451
Database
ISI
SICI code
0340-6717(200011)107:5<440:COTHNG>2.0.ZU;2-P
Abstract
Idiopathic dilated cardiomyopathy (IDC) is characterized by a thin-walled h eart with systolic dysfunction of unknown etiology. Because abnormalities i n genes for cytoskeletal proteins related to Z-disc function have recently been reported to cause IDC, genomic organization of the gene for nebulette, a novel actin-binding Z-disc protein, was determined and its sequence vari ations were searched for in Japanese patients with IDC and healthy controls . The nebulette gene consists of 28 exons, and four sequence variations lea ding to amino acid replacement (GLn187His, Met351Val, Asn654Lys, and Thr728 Ala) were identified in the patients. These variations were also found in t he healthy controls and hence they were polymorphisms and not disease-speci fic mutations. Frequencies of Gln187His, Met351Val, and Thr728Ala variants were similar in the patients and controls. However, the frequency of homozy gotes for Lys at codon 654, a variant at a relatively conserved residue in an actin-binding motif, was significantly increased in nonfamilial IDC pati ents (n=106) as compared with healthy control subjects (n=331) (7.54% vs 1. 21%, OR=6.25, P=0.002, 95% CI=1.92-20.29), while this association was not f ound in familial IDC patients (n=24). These observations suggest that the n ebulette polymorphism in the actin-binding motif was a novel genetic marker of susceptibility to nonfamilial IDC.