Rivers have been suggested to have played an important role in shaping pres
ent-day patterns of ecological and genetic variation among Amazonian specie
s and communities. Recent molecular studies have provided mixed support for
the hypothesis that large lowland Amazonian rivers have functioned as sign
ificant impediments to gene flow among populations of neotropical species.
To date, no study has systematically evaluated the impact that riverine bar
riers might have on structuring whole Amazonian communities. Our analyses o
f the phylogeography of frogs and small mammals indicate that a putative ri
verine barrier (the Jurua River) does not relate to present-day patterns of
community similarity and species richness. Rather. our results imply a sig
nificant impact of the Andean orogenic axis and associated thrust-and-fold
lowland dynamics in shaping patterns of biotic diversity along the Jurua. C
ombined results of this and other studies significantly weaken the postulat
ed role of rivers as major drivers of Amazonian diversification.