Sequence, secondary structure and phylogenetic analyses of the ribosomal internal transcribed spacer 2 (ITS2) in the Timarcha leaf beetles (Coleoptera : Chrysomelidae)

Citation
J. Gomez-zurita et al., Sequence, secondary structure and phylogenetic analyses of the ribosomal internal transcribed spacer 2 (ITS2) in the Timarcha leaf beetles (Coleoptera : Chrysomelidae), INSEC MOL B, 9(6), 2000, pp. 591-604
Citations number
64
Categorie Soggetti
Entomology/Pest Control","Molecular Biology & Genetics
Journal title
INSECT MOLECULAR BIOLOGY
ISSN journal
09621075 → ACNP
Volume
9
Issue
6
Year of publication
2000
Pages
591 - 604
Database
ISI
SICI code
0962-1075(200012)9:6<591:SSSAPA>2.0.ZU;2-R
Abstract
Internal transcribed spacer 2 (ITS2) sequences of the nuclear rDNA in forty -seven specimens (thirty-four species) of the leaf beetle genus Timarcha ha ve been studied. Timarcha ITS2 (523 bp on average) share some sequence feat ures with other Chrysomeloidea relatives (Chrysolina, Diabrotica and Bruchu s) but have no clear similarity with any other arthropod ITS2 sequences. In terspecific divergences are in the range 0.002-0.166, and 0.124-0.206 in th e comparisons between subgenera. No evidence of intragenomic divergent ITS2 sequences has been found. Secondary structures are concordant with the fou r-domain model proposed for vertebrates and yeast, but differs from those p roposed for dipterans. Phylogenetic analysis of the ITS2 data confirms the results of a previous study based on mitochondrial sequences, as the basali ty of the Metallotimarcha subgenus and the absence of phylogenetic support for the Timarchostoma subgenus.