We have carried out an extensive mutational analysis of PI-SceI, the best s
tudied intein-like homing endonuclease of the LAGLIDADG family, to find out
which amino acid residues are involved in substrate binding and processing
. Our analysis was focused on domain I, in which two regions were shown to
be in contact with DNA, and on domain II, in which the amino acid residues
making up catalytic centers I and II were identified and their role in cata
lysis investigated. As a result of our comprehensive mutational analysis a
model is presented for DNA binding and cleavage by PI-SceI.