A simple method for classifying genes and a bootstrap test for classifications

Citation
K. Misawa et F. Tajima, A simple method for classifying genes and a bootstrap test for classifications, MOL BIOL EV, 17(12), 2000, pp. 1879-1884
Citations number
45
Categorie Soggetti
Biology,"Experimental Biology
Journal title
MOLECULAR BIOLOGY AND EVOLUTION
ISSN journal
07374038 → ACNP
Volume
17
Issue
12
Year of publication
2000
Pages
1879 - 1884
Database
ISI
SICI code
0737-4038(200012)17:12<1879:ASMFCG>2.0.ZU;2-Y
Abstract
A new simple method for classifying genes is proposed based on Klastorin's method. This method classifies genes into monophyletic groups which are mad e distinct from each other by evolutionary changes. The method is applicabl e as long as the phylogenetic tree of genes is obtained. There is a fast al gorithm for obtaining the classification. A bootstrap test of a classificat ion is also presented. As an example, we classified opsin genes. The classi fication obtained by this method is the same as the previous classification based on the function of opsins.