J. Knablein et al., TA6BR12(2-RAY CRYSTALLOGRAPHY(), A TOOL FOR PHASE DETERMINATION OF LARGE BIOLOGICAL ASSEMBLIES BY X), Journal of Molecular Biology, 270(1), 1997, pp. 1-7
The title compound Ta6Br122+ is of interest for the analysis of biolog
ical structures as a heavy-metal derivative with great potential for t
he structure determination of large protein systems. Ln macromolecular
crystallography the phases of the measured structure factor amplitude
s have to be determined. The most widely used method for novel structu
res is isomorphous replacement by introducing electron-rich compounds
into the protein crystals. These compounds produce measurable changes
of the diffraction intensities, which allow phase determination. We sy
nthetized the Ta6Br122+ cluster in high yields, crystallized it, and d
etermined its crystal structure by X-ray diffraction analysis at atomi
c resolution. The cluster is a regular octahedron consisting of six me
tal atoms with 12 bridging bromine atoms along the 12 edges of the oct
ahedron. The cluster is compact, of approximately spherical shape with
about 4.3 Angstrom radius and highly symmetrical. One Ta6Br122+ ion a
dds 856 electrons to a protein, a considerable contribution to the sca
ttering power even of large proteins or multimeric systems. At low res
olution all atoms of the cluster scatter in phase and act as a super h
eavy-atom, which is easy to locate in the difference Patterson map. We
investigated its binding sites in the biologically significant high-r
esolution structures of an antibody V-L domain, dimethyl sulfoxide red
uctase, GTP-cyclohydrolase I, and the proteasome. With the randomly or
iented cluster, treated as a single site scatterer, phases could be us
ed only up to 6 Angstrom resolution. In contrast, when the cluster is
correctly oriented, phases calculated from its 18 atom sites can be us
ed to high resolution. We present the atomic structure of the Ta6Br122
+, describe a method to determine its localization and orientation in
the unit cell of protein crystals of two different proteins, and analy
se its phasing power. We show that phases can be calculated to high re
solution. The phase error is lower by more than 30 degrees compared to
the single site approximation, using a resolution of 2.2 Angstrom Fur
thermore, Ta6Br122+ has two different strong anomalous scatterers tant
alum and bromine to be used for phase determination. (C) 1997 Academic
Press Limited.