Circles: automating the comparative analysis of RNA secondary structure

Authors
Page, RDM
Citation
Rdm. Page, Circles: automating the comparative analysis of RNA secondary structure, BIOINFORMAT, 16(11), 2000, pp. 1042-1043
Citations number
11
Categorie Soggetti
Multidisciplinary
Journal title
BIOINFORMATICS
ISSN journal
13674803 → ACNP
Volume
16
Issue
11
Year of publication
2000
Pages
1042 - 1043
Database
ISI
SICI code
1367-4803(200011)16:11<1042:CATCAO>2.0.ZU;2-0
Abstract
Circles is a program for inferring RNA secondary structure using maximum we ight matching. The program can read in an alignment in FASTA, ClustalW, or NEXUS format, compute a maximum weight matching, and export one or more sec ondary structures in various file formats.