HOX genes play a fundamental role in the development of the vertebrate cent
ral nervous system, axial skeleton, limbs, gut, urogenital tract and extern
al genitalia, but it is only in the last 4 years that mutations in two of t
he 39 human HOX genes have been shown to cause congenital malformations: HO
XD13, which is mutated in synpolydactyly, and HOXA13, which is mutated in H
and-Foot-Genital syndrome. Here we review the mutations already identified
in these two genes, consider how these mutations may act, and discuss the p
ossibility that further mutations remain to be discovered both in developme
ntal disorders and in cancer.