Diversity of Paenibacillus polymyxa populations in the rhizosphere of wheat (Triticum durum) in Algerian soils

Citation
S. Guemouri-athmani et al., Diversity of Paenibacillus polymyxa populations in the rhizosphere of wheat (Triticum durum) in Algerian soils, EUR J SOIL, 36(3-4), 2000, pp. 149-159
Citations number
51
Categorie Soggetti
Environment/Ecology
Journal title
EUROPEAN JOURNAL OF SOIL BIOLOGY
ISSN journal
11645563 → ACNP
Volume
36
Issue
3-4
Year of publication
2000
Pages
149 - 159
Database
ISI
SICI code
1164-5563(200007/12)36:3-4<149:DOPPPI>2.0.ZU;2-F
Abstract
The diversity of Paenibacillus polymyxa populations associated with the rhi zosphere of durum wheat was investigated in Algerian soils sampled in regio ns where wheat had been cultivated for 5 and 26 years (Hamiz, H5 and Z26), 70 years (Algiers, D70), and more than 2 000 years (Tiaret, T2000 and K2000 ). A total of 111 strains were isolated by immunotrapping and identified as P. polymyxa using an AP150CHB kit and restriction analysis of the amplifie d 16S rDNA gene. The phenotypic characteristics of the P. polymyxa populati ons were compared and the strains found not to cluster according to their o rigin. The longer the history of wheat cultivation, the lower the phenotypi c diversity and the higher the frequency of nitrogen-fixing strains. Popula tion genetic diversity, evaluated by ERIC-PCR, showed the same trends as ph enotypic diversity. The distribution of ERIC genotypes among the different populations studied were compared using Pearson's Chi-squared test. The str ains isolated in D70, 226, and H5 derived from soil populations sharing the same genetic structure, but those isolated in T2000 and K2000 each stemmed from a population with a specific genetic structure. These data suggest th at the genetic structure of P. polymyxa populations has been affected by lo ng-term wheat cultivation. (C) 2000 Editions scientifiques et medicales Els evier SAS.