The mechanisms of lateral gene transfer in bacteria and eukaryotes are brie
fly described. The methods of reconstruction of branching phylogenies (whic
h can be represented as trees) can be modified to accommodate reticulate ev
olutionary patterns. These methods are often applied to molecular data. The
elucidation of reticulate evolution requires data of very high quality and
quantity. There is also a need for new concepts, terminology, and methods
for this field.