Genome and chromosome dimensions were determined using two accessions of Lo
tus japonicus, Miyakojima MG-20 and Gifu B-129. The genome sizes of Miyakoj
ima and Gifu were determined as 472.1 and 442.8 Mbp, respectively. Both the
accessions were diploid (2n=12) and six chromosomes were identified and ch
aracterized based on the condensation patterns and the locations of rDNA lo
ci. The obvious polymorphism observed in the genome size and the chromosome
morphology between the two accessions, revealed specific accumulation of h
eterochromatin in Miyakojima or elimination in Gifu. The chromosomes L. jap
onicus were numbered according to their length. A quantitative chromosome m
ap was also developed by the imaging methods using the digital data of the
condensation pattern. 45S rDNA loci were localized on chromosomes A and F,
and 5S rDNA locus was localized on chromosome A by fluorescence in situ hyb
ridization (FISH). Identification of the chromosome and genome sizes and de
velopment of the quantitative chromosome map represent significant contribu
tion to the L. japonicus genome project as the basic information.