The ARKdb: genome databases for farmed and other animals

Citation
J. Hu et al., The ARKdb: genome databases for farmed and other animals, NUCL ACID R, 29(1), 2001, pp. 106-110
Citations number
8
Categorie Soggetti
Biochemistry & Biophysics
Journal title
NUCLEIC ACIDS RESEARCH
ISSN journal
03051048 → ACNP
Volume
29
Issue
1
Year of publication
2001
Pages
106 - 110
Database
ISI
SICI code
0305-1048(20010101)29:1<106:TAGDFF>2.0.ZU;2-W
Abstract
The ARKdb genome databases provide comprehensive public repositories for ge nome mapping data from farmed species and other animals (http://www.thearkd b.org) providing a resource similar in function to that offered by GDB or M GD for human or mouse genome mapping data, respectively. Because we have at tempted to build a generic mapping database, the system has wide utility, p articularly for those species for which development of a specific resource would be prohibitive. The ARKdb genome database model has been implemented for 10 species to date. These are pig, chicken, sheep, cattle, horse, deer, tilapia, cat, turkey and salmon. Access to the ARKdb databases is effected via the World Wide Web using the ARKdb browser and Anubis map viewer. The information stored includes details of loci, maps, experimental methods and the source references. Links to other information sources such as PubMed a nd EMBL/GenBank are provided. Responsibility for data entry and curation is shared amongst scientists active in genome research in the species of inte rest. Mirror sites in the United States are maintained in addition to the c entral genome server at Roslin.