A simple probabilistic scoring method for protein domain identification

Authors
Murvai, J Vlahovicek, K Pongor, S
Citation
J. Murvai et al., A simple probabilistic scoring method for protein domain identification, BIOINFORMAT, 16(12), 2000, pp. 1155-1156
Citations number
10
Categorie Soggetti
Multidisciplinary
Journal title
BIOINFORMATICS
ISSN journal
13674803 → ACNP
Volume
16
Issue
12
Year of publication
2000
Pages
1155 - 1156
Database
ISI
SICI code
1367-4803(200012)16:12<1155:ASPSMF>2.0.ZU;2-H
Abstract
A simple heuristic scoring method is described for assigning sequences to k nown domain types based on BLAST search outputs. The scoring is based on th e score distribution of the known domnin groups determined from a database versus database comparison and is directly applicable to BLAST output proce ssing.