DNA polymerase eta (Pol eta) functions in error-free replication of W-damag
ed DNA, and in vitro it efficiently bypasses a cis-syn T-T dimer by incorpo
rating two adenines opposite the lesion. Steady state kinetic studies have
shown that both yeast and human Pol eta are low-fidelity enzymes, and they
misincorporate nucleotides with a frequency of 10(-2)-10(-3) on both undama
ged and T-T dimer-containing DNA templates. To better understand the role o
f Pol eta in error-free translesion DNA synthesis, here we examine the abil
ity of Pol eta to extend from base mismatches. We find that both yeast and
human Pol eta extend from mismatched base pairs with a frequency of similar
to 10(-3) relative to matched base pairs. In the absence of efficient exte
nsion of mismatched primer termini, the ensuing dissociation of Pol eta fro
m DNA may favor the excision of mismatched nucleotides by a proofreading ex
onuclease. Thus, we expect DNA synthesis by Pol eta to be more accurate tha
n that predicted from the fidelity of nucleotide incorporation alone.