Synthesis and structure-activity relationships of a new model of arylpiperazines. 6. Study of the 5-HT1A/alpha(1)-adrenergic receptor affinity by classical Hansch analysis, artificial neural networks, and computational simulation of ligand recognition
Ml. Lopez-rodriguez et al., Synthesis and structure-activity relationships of a new model of arylpiperazines. 6. Study of the 5-HT1A/alpha(1)-adrenergic receptor affinity by classical Hansch analysis, artificial neural networks, and computational simulation of ligand recognition, J MED CHEM, 44(2), 2001, pp. 198-207
A classical quantitative structure-activity relationship (Hansch) study and
artificial neural networks (ANNs) have been applied to a training set of 3
2 substituted phenylpiperazines with affinity for 5-HT1A and alpha (1)-adre
nergic receptors, to evaluate the structural requirements that are responsi
ble for 5-HT1A/alpha (1) selectivity. The resulting models provide a signif
icant correlation of electronic, steric, and hydrophobic parameters with th
e biological affinities. Although the derived linear Hansch correlations gi
ve good statistics and acceptable predictions, the introduction of nonlinea
r relationships in the analysis gives more solid models and more accurate p
redictions. In the ANN models on the basis of the obtained 3D plots, the 5-
HT1A affinity has a nonlinear dependence on F, V-o, V-m, and pi (o), althou
gh the nonlinear relationship is not far from a planar one. The alpha (1)-a
drenergic receptor affinity has a clear nonlinear dependence on F, V-o, V-m
, pi (o), and pi (m). A comparison of both analyses gives an additional und
erstanding for 5-HT1A/alpha (1) selectivity: (a) high F values increase the
binding affinity for 5-HT1A receptors and decrease the affinity for alpha
(1) sites; (b) the hydrophobicity at the meta-position has only influence f
or the alpha (1)-adrenergic receptor; (c) the meta-position seems to be imp
licated in the 5-HT1A/alpha (1) selectivity. While the 5-HT1A receptor is a
ble to accommodate bulky substituents in the region of its active site, the
steric requirements of the alpha (1)-adrenergic receptor at this position
are more restricted. This information was used for the design of the new li
gand EF-7412 (33) (5-HT1A: K-i (exptl) = 27 nM, alpha (1): K-i (exptl) > 10
00 nM; 5-HT1A: K-i (pred) (ANN) = 36 nM, alpha (1): K-i (pred) (ANN) = 2745
nM) which was characterized as an antagonist in vivo in pre- and postsynap
tic 5-HT1AR sites. Computational simulations of the complex between EF-7412
(33) and a 3D model of the transmembrane domain of the 5-HT1A receptor all
owed us to define the molecular details of the ligand-receptor interaction
that includes: (i) the ionic interaction between the protonated amine of th
e ligand and Asp 3.32; (ii) the hydrogen bonds between the m-NHSO2Et group
of the ligand and Asn 7.39; and the hydrogen bonds between the hydantoin mo
iety of the ligand and (iii) Thr 3.37, (iv) Ser 5.42, and (v) Thr 5.43. The
se QSAR and ANN results in combination with computational simulations of li
gand recognition will be useful for the design of potent selective 5-HT1A l
igands.