The identification of tags that can specifically mark activated synapses is
important for understanding how long-term synaptic changes can be restrict
ed to specific synapses. The maintenance of synapse-specific facilitation i
n Aplysia sensory to motor neuron cultures can be blocked by inhibitors of
translation and by the drug rapamycin, which specifically blocks a signalin
g pathway that regulates phosphorylation of translational regulators. One i
mportant target of rapamycin is the phosphorylation and subsequent activati
on of S6 kinase. To test whether S6 kinase is the target for the ability of
rapamycin to block synapse-specific facilitation in Aplysia, we cloned Apl
ysia S6 kinase, its substrate S6, and the S6 kinase kinase phosphoinositide
-dependent kinase 1 (PDK-1). Serotonin, which induces synapse-specific faci
litation, increased phosphorylation of Aplysia S6 kinase at threonine 399 i
n a rapamycin-sensitive manner in Aplysia synaptosomes. The phosphorylation
of threonine 399 by 5-HT was independent of phosphoinositide-3 kinase, dep
endent on PKA and PKC, and occluded by the phosphatase inhibitor calyculin-
A. 5-HT also increased S6 kinase activity and led to increased phosphorylat
ion of S6 in synaptosomes. 5-HT increased levels of S6 in synaptosomes beca
use of a rapamycin-sensitive increase in translation-stabilization of S6. A
plysia PDK-1 bound to and phosphorylated Aplysia S6 kinase but only modulat
ed phosphorylation of threonine 399 indirectly. These results suggest a mec
hanism by which the levels of translation factors can be increased specific
ally at activated synapses generating a longlasting synaptic tag.