A 34-amino acid synthetic peptide was derived from the third domain of huma
n alpha-fetoprotein, and the peptide was shown to inhibit estrogen-stimulat
ed growth. Under certain conditions, however, the peptide lost growth-inhib
itory activity. A biophysical study of the peptide was undertaken with a go
al of obtaining completely reliable preparations. The peptide was studied u
sing gel-filtration column chromatography as a function of peptide concentr
ation and age of solution, and was found to exhibit complex aggregation beh
aviors. During the early period (0-3 h) after dissolving lyophilized peptid
e into pH 7.4 buffer, solutions were composed mostly of trimers. At higher
peptide concentrations (greater than or equal to3.0 g/L), the trimers aggre
gated extensively to a large aggregate (minimum size approximate to 102 pep
tides). At 5.0-8.0 g/L, these large aggregates increased in size (up to app
roximate to 146 peptides) until trimers were largely exhausted from solutio
n. During the later times (>3 h) after sample preparation, the trimeric oli
gomer of the peptide dissociated slowly to form dimers for samples at 0.10-
3.0 g/L. After their build-up, a very small number of dimers associated to
form hexamers. Disulfide bonds stabilized the dimers as indicated by the co
nversion of dimers to trimers upon the addition of a reducing agent, and th
e failure of dimers to form in the presence of reducing agent. Reducing age
nt did not affect trimer or large aggregate formation. Trimers were found t
o be active in an assay monitoring inhibition of estrogen-stimulated growth
, whereas dimers and large aggregates were inactive. The two cysteines in t
he peptide were modified to either S-methylcysteine or S-(2-aminoethyl)cyst
eine, and both derivatives showed significant growth-inhibition activity. A
serine analog in which both cysteines were replaced had very different agg
regation behavior than the cysteine peptide and lacked its growth inhibitor
y ability. Peptide aggregation is critically important in establishing the
ability of the peptide to inhibit growth and have anticancer activity, but
the state of its two cysteines is of little influence.