FAST, ACCURATE SEMIEMPIRICAL MOLECULAR-ORBITAL CALCULATIONS FOR MACROMOLECULES

Authors
Citation
Sl. Dixon et Km. Merz, FAST, ACCURATE SEMIEMPIRICAL MOLECULAR-ORBITAL CALCULATIONS FOR MACROMOLECULES, The Journal of chemical physics, 107(3), 1997, pp. 879-893
Citations number
36
Categorie Soggetti
Physics, Atomic, Molecular & Chemical
ISSN journal
00219606
Volume
107
Issue
3
Year of publication
1997
Pages
879 - 893
Database
ISI
SICI code
0021-9606(1997)107:3<879:FASMCF>2.0.ZU;2-K
Abstract
A detailed review of the semiempirical divide-and-conquer (D&C) method is given, including a new approach to subsetting, which involves dual buffer regions. Comparisons are drawn between this method and other s emiempirical macromolecular schemes. D&C calculations are carried out using a basic 32 Mbyte memory workstation on a variety of peptide syst ems, including proteins containing up to 1960 atoms. Aspects of storag e and SCF convergence are addressed, and parallelization of the D&C al gorithm is discussed. (C) 1997 American Institute of Physics.