The origin of the ratites, large flightless birds from the Southern Hemisph
ere, along with their flighted sister taxa, the South American tinamous, is
central to understanding the role of plate tectonics in the distributions
of modern birds and mammals. Defining the dates of ratite divergences is al
so critical for determining the age of modern avian orders(1-6). To resolve
the ratite phylogeny and provide biogeographical data to examine these iss
ues, we have here determined the first complete mitochondrial genome sequen
ces of any extinct taxa-two New Zealand moa genera-along with a 1,000-base-
pair sequence from an extinct Madagascan elephant-bird. For comparative dat
a, we also generated 12 kilobases of contiguous sequence from the kiwi, cas
sowary, emu and two tinamou genera. This large dataset allows statistically
precise estimates of molecular divergence dates and these support a Late C
retaceous vicariant speciation of ratite taxa, followed by the subsequent d
ispersal of the kiwi to New Zealand. This first molecular view of the break
-up of Gondwana provides a new temporal framework for speciation events wit
hin other Gondwanan biota and can be used to evaluate competing biogeograph
ical hypotheses.