Stress-inducible MICA (MHC class I chain-related A) is known to bind to NKG
2D, which is one of the natural killer (NK) cell receptors, and plays a rol
e in immune surveillance. We have reported that a MICA-MICB null haplotype
is in linkage disequilibrium with HLA-B*4801 in the Japanese population. In
the haplotype, an approximately 100-kb deletion, including the entire MICA
gene, was observed and MICB possessed a premature stop codon. In this stud
y, a multiplex polymerase chain reaction (PCR) method was developed for det
ecting the MICA deletion. MICB alleles were typed by PCR-single-strand conf
ormation polymorphism (SSCP) method and direct sequencing. The frequency of
the MICA-MICB arm haplotype was 3.7% on the average, and was strongly asso
ciated with HLA-B48 in seven East Asian populations. It was presumed that t
he stop codon of MICB gene generated after the large-scale deletion. The wi
de distribution of the null haplotype at polymorphic frequencies suggests t
hat the haplotype has been conservatively maintained because of some select
ive advantage.