Amino acid residues involved in substrate binding and catalysis in an insect digestive beta-glycosidase

Citation
Sr. Marana et al., Amino acid residues involved in substrate binding and catalysis in an insect digestive beta-glycosidase, BBA-PROT ST, 1545(1-2), 2001, pp. 41-52
Citations number
37
Categorie Soggetti
Biochemistry & Biophysics
Journal title
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY
ISSN journal
01674838 → ACNP
Volume
1545
Issue
1-2
Year of publication
2001
Pages
41 - 52
Database
ISI
SICI code
0167-4838(20010209)1545:1-2<41:AARIIS>2.0.ZU;2-I
Abstract
A beta -glycosidase (M-r 50 000) from Spodoptera frugiperda larval midgut w as purified, cloned and sequenced. It is active on aryl and alkyl P-glucosi des and cellodextrins that are all hydrolyzed at the same active site, as i nferred from experiments of competition between substrates. Enzyme activity is dependent on two ionizable groups (pK(a1) = 4.9 and pK(a2) = 7.5). Effe ct of pH on carbodiimide inactivation indicates that the pK(a) 7.5 group is a carboxyl. k(cat) and K-m values were obtained for different p-nitropheny l beta -glycosides and K-i values were determined for a range of alkyl beta -glucosides and cellodextrins, revealing that the aglycone site has three subsites. Binding data, sequence alignments and literature beta -glycosidas e 3D data supported the following conclusions: (1) the groups involved in c atalysis were E-187 (proton donor) and E-399 (nucleophile); (2) the glycone moiety is stabilized in the transition state by a hydrophobic region aroun d the C-6 hydroxyl and by hydrogen bonds with the other equatorial hydroxyl s; (3) the aglycone site is a cleft made up of hydrophobic amino acids with a polar amino acid only at its first (+1) subsite. (C) 2001 Elsevier Scien ce B.V. All rights reserved.