How do lipases and esterases work: the electrostatic contribution

Citation
Mtn. Petersen et al., How do lipases and esterases work: the electrostatic contribution, J BIOTECH, 85(2), 2001, pp. 115-147
Citations number
36
Categorie Soggetti
Biotecnology & Applied Microbiology",Microbiology
Journal title
JOURNAL OF BIOTECHNOLOGY
ISSN journal
01681656 → ACNP
Volume
85
Issue
2
Year of publication
2001
Pages
115 - 147
Database
ISI
SICI code
0168-1656(20010213)85:2<115:HDLAEW>2.0.ZU;2-K
Abstract
This work explores the role of one of the factors explaining lipase/esteras e activity: the contribution of electrostatic interactions to lipase/estera se activity. The electrostatic potential distribution on the molecular surf ace of an enzyme as a function of pH determines, to a large extent, the enz yme's pH activity profile. Other important factors include the presence and distribution of polar and hydrophobic residues in the active cleft. We hav e mapped the electrostatic potential distribution as a function of pH on th e molecular surface of nine lipases/esterases for which the 3D structure is experimentally known. A comparison of these potential maps at different pH values with the corresponding pH-activity profile, pH optimum or pH range where the activity displayed by the enzyme is maximum, has revealed a consi derable correlation. A negative potential in the active site appears correl ated with maximum activity towards triglycerides, which has prompted us to propose a model for product release ('The electrostatic catapult model') af ter cleavage of an ester bond. At the same time as the bottom of the active site cleft becomes negatively charged, other nearby regions also titrate a nd become negatively charged when pH becomes more alkaline, for some of the studied lipases. If such lipases also show phospholipase activity (such as guinea pig lipase-related proteins 2 chimera) we raise the hypothesis that such other titratable regions after becoming negatively charged might stab ilise the positive charge present in the polar head of phospholipids, such as phosphatidylcholine, phosphatidylethanolamine and phosphatidylserine. Th e distribution of polar, weak polar and non-polar residues on the molecular surface of each studied lipase, in particular the active site region, was compared for all the lipases studied. The combination of graphical visualis ation of the electrostatic potential maps and the polarity maps combined wi th knowledge about the location of key residues on the protein surface allo ws us to envision atomic models for lipolytic activity. (C) 2001 Elsevier S cience B.V. All rights reserved.