Total synthesis and structural elucidation of khafrefungin, a novel antifun
gal agent isolated from the fermentation culture MF6020, have been achieved
. Unlike other inhibitors that inhibit the corresponding enzyme in fungi an
d mammals to the same extent, khafrefungin does not impair sphingolipid syn
thesis of mammals. The basic strategy for the structural elucidation is to
prepare all stereoisomers of the structurally simplified khafrefungin mimic
s 1 and 2 that were designed for the elucidation of C10,11,12 and C2',3',4'
relative stereochemistry, respectively. The comparison of their spectra wi
th those of natural khafrefungin would result in the identification of eigh
t possible stereoisomers, and the analytical details of these eight stereoi
somers have led to the complete stereochemical assignment. On the basis of
the structural elucidation, the total synthesis of khafrefungin has been ac
complished by using tin(II)-catalyzed asymmetric aldol reactions as key ste
ps.