Rapid silica matrix binding-based isolation of DNA from various wood-rotting and mycorrhizal basidiomycete fungi suitable for their detection by multiplex PCR
S. Schulze, Rapid silica matrix binding-based isolation of DNA from various wood-rotting and mycorrhizal basidiomycete fungi suitable for their detection by multiplex PCR, Z PFLANZENK, 107(6), 2000, pp. 664-671
Citations number
37
Categorie Soggetti
Plant Sciences
Journal title
ZEITSCHRIFT FUR PFLANZENKRANKHEITEN UND PFLANZENSCHUTZ-JOURNAL OF PLANT DISEASES AND PROTECTION
Newer polymerase chain reaction (PCR)-based techniques for rapid detection
and quantification of fungal pathogens, which were developed in recent year
s, are briefly summarized. The QIAamp DNA Mini Kit protocol featuring SDS/a
lkali/Proteinase K/guanidine isothiocyanate-lysis and adsorption of the DNA
onto a silica matrix proved to be a very simple, fast and reproducible met
hod to extract and purify DNA both from various basidiomycete fungi and inf
ected plane material. The DNA is of high quality and can be used directly f
or different PCR assays even in low technology laboratories. Applying diver
se taxon-specific primers concomitantly in the same PCR assay (multiplex PC
R) a simultaneous detection of the two important forest pathogens Armillari
a ostoyae and Heterobasidion annosum was possible. The finding of H, annosu
m hybrid 'SP' genets both in Pirea sp, and Pinus sp. is an indication of ge
ne flow in nature between the two ISGs and of no strong correlation between
host species and ISG (host specifity) in Europe.