Lyme arthritis is caused in Europe by three main pathogenic species of Borr
elia burgdorferi sensu late: Borrelia burgdorferi sensu stricto, Borrelia g
arinii, and Borrelia afzelii. Because few synovial samples have yet been an
alysed by species-specific DNA amplification methods, further studies are n
eeded to define the spectra of clinical manifestations associated with thes
e different species. Two cases of treatment resistant Lyme arthritis are re
ported here, in which DNA amplification of the flagellin gene followed by d
ot-blot hybridisation in the synovial fluid identified B garinii as the cau
sative agent. Clinical and biological data did not differ from the usual de
scriptions of Lyme arthritis, but as the recently reported molecular mimicr
y between OspA and hLFA1 is not applicable to B garinii, the pathogenesis o
f the present cases remains unclear. Future studies should aim at assessing
the role of B garinii in European Lyme arthritis and its possible pathogen
ic and therapeutic consequences.