We systematically investigated the vibrational properties and total energy
of defects containing two boron atoms in Si by a first-principles calculati
on. Our calculations were performed for six configurations with two substit
utional B atoms, including up to the fifth-nearest neighbors, which are fou
nd to be electrically active, and for the (001) B-2 cluster. The total ener
gy calculation reveals that two substitutional boron atoms prefer configura
tions remote from each other because of tensile stress. Comparing calculate
d IR frequencies and isotope shifts with experimental ones, we found that t
he previous interpretation is inadequate for the vibrational modes of the f
irst-nearest-neighbor B-2 cluster. Furthermore, it is shown that the theore
tical IR peaks of (001) B-2 give a reasonable explanation for the experimen
tal ones whose origin has not been clarified for more than 30 years. Thus t
he existence of (001) B-2 is confirmed with respect to the atomic structure
. We further calculated the electronic structure of(001) B-2, and found it
to be consistent with near-edge x-ray absorption fine-structure spectroscop
y data.