3-DIMENSIONAL STRUCTURES AND CONTEXTS ASSOCIATED WITH RECURRENT AMINO-ACID-SEQUENCE PATTERNS

Authors
HAN KF BYSTROFF C BAKER D
Citation
Kf. Han et al., 3-DIMENSIONAL STRUCTURES AND CONTEXTS ASSOCIATED WITH RECURRENT AMINO-ACID-SEQUENCE PATTERNS, Protein science, 6(7), 1997, pp. 1587-1590
Citations number
15
Categorie Soggetti
Biology
Journal title
Protein science → ACNP
ISSN journal
09618368
Volume
6
Issue
7
Year of publication
1997
Pages
1587 - 1590
Database
ISI
SICI code
0961-8368(1997)6:7<1587:3SACAW>2.0.ZU;2-4
Abstract
We have used cluster analysis to identify recurring sequence patterns that transcend protein family boundaries. A subset of these patterns o ccur predominantly in a single type of local structure in proteins. He re we characterize the three-dimensional structures and contexts in wh ich these sequence patterns occur, with particular attention to the in teractions responsible for their structural selectivity.