Mitochondrial DNA (mtDNA) sequencing has been validated as a useful tool fo
r forensic analysis. However, there are several aspects of the analysis whi
ch need to be considered in order to evaluate the value of the evidence. On
e of these aspects is related to heteroplasmy which is the state when two o
r more mtDNA populations occur in a single individual, cell or mitochondrio
n. In this report a case is described where the mtDNA profile of the blood
sample of a raped woman was compared with the mtDNA profile of a single hai
r found in the suspect's car. The results obtained show differences in sequ
ence between different portions of the hair and the victim's sequence. Thes
e differences are related to various heteroplasmy events. The concordance b
etween the hair sample and the potential source (victim) of this sample is
questionable and the strength of the evidence depends on how the sequence i
nformation is interpreted by the expert. The discussion of the results emph
asises the necessity to evaluate heteroplasmic events in routine forensic w
ork.