T. Singer et al., Robertson's Mutator transposons in A-thaliana are regulated by the chromatin-remodeling gene Decrease in DNA Methylation (DDM1), GENE DEV, 15(5), 2001, pp. 591-602
Robertson's Mutator transposable elements in maize undergo cycles of activi
ty and then inactivity that correlate with changes in cytosine methylation.
Mutator-like elements are present in the Arabidopsis genome but are heavil
y methylated and inactive. These elements become demethylated and active in
the chromatin-remodeling mutant ddm1 ((D) under bar ecrease in (D) under b
ar NA (M) under bar ethylation), which leads to loss of heterochromatic DNA
methylation. Thus, DNA transposons in plants appear to be regulated by chr
omatin remodeling. In inbred ddm1 strains, transposed elements may account,
in part, for mutant phenotypes unlinked to ddm1. Gene silencing and paramu
tation are also regulated by DDM1, providing support for the proposition th
at epigenetic silencing is related to transposon regulation.