Gene knockout is considered to be a major component of the functional genom
ics toolbox, and is aimed at revealing the function of genes discovered thr
ough large-scale sequencing programs. In the past few years, several Arabid
opsis populations mutagenized with insertion elements, such as the T-DNA of
Agrobacterium or transposons, have been produced. These large populations
are routinely screened for insertions into specific genes, allowing mass-is
olation of knockout lines. Although many Arabidopsis knockouts have already
been obtained, few of them have been reported to present informative pheno
types that provide a direct clue to gene function. Although functional redu
ndancy explains the lack of phenotypical alterations in some cases, ii also
appears that many mutations are conditional and/or do not alter plant morp
hology even in the presence of severe physiological defects. Consequently,
gene knockout per se is not sufficient to assess gene function and must be
integrated into a more global approach for determining biological functions
.