Transient UV Raman spectroscopy finds no crossing barrier between the peptide alpha-helix and fully random coil conformation

Citation
Ik. Lednev et al., Transient UV Raman spectroscopy finds no crossing barrier between the peptide alpha-helix and fully random coil conformation, J AM CHEM S, 123(10), 2001, pp. 2388-2392
Citations number
32
Categorie Soggetti
Chemistry & Analysis",Chemistry
Journal title
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
ISSN journal
00027863 → ACNP
Volume
123
Issue
10
Year of publication
2001
Pages
2388 - 2392
Database
ISI
SICI code
0002-7863(20010314)123:10<2388:TURSFN>2.0.ZU;2-4
Abstract
Transient UV resonance Raman measurements excited within the amide pi --> p i* transitions of a 21 unit alpha -helical peptide has for the first time d etermined a lower bound for the unfolding rate of the last alpha -helical t urn to form a fully random coil peptide. A 3 ns T-jump is generated with 1. 9 mum laser pulses, which are absorbed by water. Subsequent 3 ns 204 nm UV pulses excite the amide Raman spectra at delay times between 3 ns and 1 ms, to monitor the peptide conformational evolution. We find similar to 180 ns relaxation times which result in a rate constant of >5 x 10(6) s(-1) for u nfolding of the last alpha -helical turn. Our data are inconsistent with sl ow alpha -helix nuclei melting.