Water interaction with glycine betaine: A hybrid QM/MM molecular dynamics simulation

Citation
M. Sironi et al., Water interaction with glycine betaine: A hybrid QM/MM molecular dynamics simulation, PHYS CHEM P, 3(6), 2001, pp. 1081-1085
Citations number
40
Categorie Soggetti
Physical Chemistry/Chemical Physics
Journal title
PHYSICAL CHEMISTRY CHEMICAL PHYSICS
ISSN journal
14639076 → ACNP
Volume
3
Issue
6
Year of publication
2001
Pages
1081 - 1085
Database
ISI
SICI code
1463-9076(2001)3:6<1081:WIWGBA>2.0.ZU;2-8
Abstract
Experiments suggest that under conditions of water stress the preservation of functional stereodynamics of biomolecules by so-called 'compatible solut es' is related to their interaction with water. In the present work, the in teraction of water with glycine betaine, which is one of the osmoprotectant s most effective and widespread in nature, is investigated using quantum me chanical calculations and QM/MM molecular dynamics simulation. Its effects on structure and dynamics of the surrounding water are compared with those exerted by two other remarkable bioprotectants: the disaccharide trehalose and the quaternary ammonium compound TMAO (trimethylamine-N-oxide). In part icular, statistical analysis of a 500 ps simulation trajectory evidences co mmon features of the 3D water distributions around glycine betaine and TMAO .