Backbone and side-chain C-13 and N-15 signal assignments of the alpha-spectrin SH3 domain by magic angle spinning solid-state NMR at 17.6 tesla

Citation
J. Pauli et al., Backbone and side-chain C-13 and N-15 signal assignments of the alpha-spectrin SH3 domain by magic angle spinning solid-state NMR at 17.6 tesla, CHEMBIOCHEM, 2(4), 2001, pp. 272-281
Citations number
39
Categorie Soggetti
Chemistry & Analysis
Journal title
CHEMBIOCHEM
ISSN journal
14394227 → ACNP
Volume
2
Issue
4
Year of publication
2001
Pages
272 - 281
Database
ISI
SICI code
1439-4227(20010402)2:4<272:BASCAN>2.0.ZU;2-3
Abstract
The backbone and side-chain C-13 and N-15 signals of a solid 62-residue (u- C-13,N-15)-labelled protein containing the alpha -spectrin SH3 domain were assigned by two-dimensional (2D) magic angle spinning (MAS) N-15- C-13 and C-13- C-13 dipolar correlation spectroscopy at 17.6 T. The side-chain signa l sets of the individual amino acids were identified by 2D C-13-C-13 proton -driven spin diffusion and dipolar recoupling experiments. Correlations to the respective backbone nitrogen signals were established by 2D NCACX (CX = any carbon atom) experiments, which contain a proton - nitrogen and a nitr ogen-carbon cross-polarisation step followed by a carbon-carbon homonuclear transfer unit Interresidue correlations leading to sequence-specific assig nments were obtained from 2D NCOCX experiments. The assignment is nearly co mplete for the SH3 domain residues 7-61, while the signals of the N- and C- terminal residues 1-6 and 62, respectively, outside the domain boundaries a re not detected in our MAS spectra. The resolution observed in these spectr a raises expectations that receptor-bound protein ligands and slightly larg er proteins (up to 20 kDa) can be readily assigned in the near future by us ing three-dimensional versions of the applied or analogous techniques.