Assembly of the soluble N-ethylmaleimide sensitive factor attachment protei
n receptor (SNARE) complex is an essential step for neurotransmitter releas
e in synapses. The presynaptic plasma membrane associated-proteins (t-SNARE
s), SNAP-25 (synaptosome-associated protein of 25,000 Da) and syntaxin 1A m
ay form an intermediate complex that later binds to vesicle-associated memb
rane protein 2 (VAMP2), Using spin labeling electron paramagnetic resonance
(EPR), we found that the two t-SNARE proteins assemble into a parallel fou
r-helix bundle that consists of two identical syntaxin IA components and th
e N-terminal and C-terminal domains of SNAP-25, Although the structure is g
enerally similar to that of the final SNARE complex, the middle region of t
he helical bundle appears more flexible in the t-SNARE complex, Such flexib
ility might facilitate interactions between VAMP2 and the t-SNARE complex.