Studies of prion biology and diseases have elucidated several new concepts,
but none was more heretical than the proposal that the biological properti
es that distinguish different prion strains are enciphered in the disease-c
ausing prion protein (PrPSC). To explore this postulate, we examined the pr
operties of PrPSC from eight prion isolates that propagate in Syrian hamste
r (SHa). Using resistance to protease digestion as a marker for the undenat
ured protein, we examined the conformational stabilities of these PrPSC mol
ecules. All eight isolates showed sigmoidal patterns of transition from nat
ive to denatured PrPSC as a function of increasing guanidine hydrochloride
(GdnHCl) concentration. Half-maximal denaturation occurred at a mean value
of 1.48 M GdnHCl for the Sc237, HY, SHa(Me7), and MT-CS isolates, all of wh
ich have similar to 75-d incubation periods; a concentration of 1.08 M was
found for the DY strain with a similar to 170-d incubation period and simil
ar to1.25 M for the SHa(RML) and 139H isolates with similar to 180-d incuba
tion periods. A mean value of 1.39 M GdnHCl for the Me7-H strain with a sim
ilar to 320-d incubation period was found. Based on these results, the eigh
t prion strains segregated into four distinct groups. Our results support t
he unorthodox proposal that distinct PrPSC conformers encipher the biologic
al properties of prion strains.