Development of high-throughput 'biochip' technologies has dramatically enha
nced our ability to study biology and explore the molecular basis of diseas
e. Biochips enable massively parallel molecular analyses to be carried out
in a miniaturized format with a very high throughput. This review will high
light applications of the various biochip technologies in cancer research,
including analysis of 1) disease predisposition by using single-nucleotide
polymorphism (SNP) microarrays, 2) global gene expression patterns by cDNA
microarrays, 3) concentrations, functional activities or interactions of pr
oteins with proteomic biochips, and 4) cell types or tissues as well as cli
nical endpoints associated with molecular targets by using tissue microarra
ys, One can predict that individual cancer risks can, in the future, be est
imated accurately by a microarray profile of multiple SNPs in critical gene
s. Diagnostics of cancer will be facilitated by biochip readout of activity
levels of thousands of genes and proteins. Biochip diagnostics coupled wit
h informatics solutions will form the basis of individualized treatment dec
isions for cancer patients.