Phosphinothricin (PPT) is the active component of a family of environmental
ly safe, nonselective herbicides. Resistance to PPT in transgenic crops has
been reported by nuclear expression of a bar transgene encoding phosphinot
hricin acetyltransferase, a detoxifying enzyme. We report here expression o
f a bacterial bar gene (b-bar1) in tobacco (Nicotiana tabacum cv Petit Hava
na) plastids that confers field-level tolerance to Liberty, an herbicide co
ntaining PPT. We also describe a second bacterial bar gene (b-bar2) and a c
odon-optimized synthetic bar (s-bar) gene with significantly elevated level
s of expression in plastids (>7% of total soluble cellular protein). Althou
gh these genes are expressed at a high level, direct selection thus far did
not yield transplastomic clones, indicating that subcellular localization
rather than the absolute amount of the enzyme is critical for direct select
ion of transgenic clones. The codon-modified s-bar gene is poorly expressed
in Escherichia coli, a common enteric bacterium, due to differences in cod
on use. We propose to use codon usage differences as a precautionary measur
e to prevent expression of marker genes in the unlikely event of horizontal
gene transfer from plastids to bacteria. Localization of the bar gene in t
he plastid genome is an attractive alternative to incorporation in the nucl
ear genome since there is no transmission of plastid-encoded genes via poll
en.