Transcription initiation in eukaryotes is controlled by nucleoprotein compl
exes formed through cooperative interactions among multiple transcription r
egulatory proteins. These complexes may be assembled via stochastic collisi
ons or defined pathways, We investigated the dynamics of Fos-Jun-NFAT1 comp
lexes by using a multicolor fluorescence resonance energy transfer assay. F
os-Jun heterodimers can bind to AP-I sites in two opposite orientations, on
ly one of which is populated in mature Fos-Jun-NFAT1 complexes. We studied
the reversal of Fos-Jun binding orientation in response to NFAT1 by measuri
ng the efficiencies of energy transfer from donor fluorophores linked to op
posite ends of an oligonucleotide to an acceptor fluorophore linked to one
subunit of the heterodimer. The reorientation of Fos-Jun by NFAT1 was not i
nhibited by competitor oligonucleotides or heterodimers. The rate of Fos-Ju
n reorientation was faster than the rate of heterodimer dissociation at som
e binding sites. The facilitated reorientation of Fos-Jun heterodimers ther
efore can enhance the efficiency of Fos-Jun-NFAT1 complex formation. We als
o examined the influence of the preferred orientation of Fos-Jun binding on
the stability and transcriptional activity of Fos-Jun-NFAT1 complexes, Com
plexes formed at sites where Fos-Jun favored the same binding orientation i
n the presence and absence of NFAT1 exhibited an B-fold slower dissociation
rate than complexes formed at sites where Fos-Jun favored the opposite bin
ding orientation. Fos-Jun-NFAT1 complexes also exhibited greater transcript
ion activation at promoter elements that favored the same orientation of Fo
s-Jun binding in the presence and absence of NFAT1, Thus, the orientation o
f heterodimer binding can influence both the dynamics and promoter selectiv
ity of multiprotein transcription regulatory complexes.