In this paper, biochemical process equations are presented as a basis for w
ater quality modelling in rivers under aerobic and anoxic conditions. These
equations are not new, but they summarise parts of the development over th
e past 75 years. The primary goals of the presentation are to stimulate com
munication among modellers and field-oriented researchers of river water qu
ality and of wastewater treatment, to facilitate practical application of r
iver water quality modelling, and to encourage the use of elemental mass ba
lances for the derivation of stoichiometric coefficients of biochemical tra
nsformation processes. This paper is part of a series of three papers. In t
he first paper, the general modelling approach is described; in the present
paper, the biochemical process equations of a complex model are presented;
and in the third paper, recommendations are given for the selection of a r
easonable submodel for a specific application.