Macromolecular electrostatics: continuum models and their growing pains

Authors
Citation
T. Simonson, Macromolecular electrostatics: continuum models and their growing pains, CURR OP STR, 11(2), 2001, pp. 243-252
Citations number
88
Categorie Soggetti
Biochemistry & Biophysics
Journal title
CURRENT OPINION IN STRUCTURAL BIOLOGY
ISSN journal
0959440X → ACNP
Volume
11
Issue
2
Year of publication
2001
Pages
243 - 252
Database
ISI
SICI code
0959-440X(200104)11:2<243:MECMAT>2.0.ZU;2-B
Abstract
Theoretical understanding of macromolecular electrostatics has advanced sub stantially over the past year. Continuum models have given promising result s for calculating protein-ligand binding free energy differences, as well a s pK(a)s and redox properties, particularly with explicit treatment of mult iple conformers. Generalized Born and other techniques have led to the firs t molecular dynamics simulations of proteins and RNA with continuum solvent . Continuum and microscopic descriptions of dielectric relaxation have been critically compared.