We developed a nested, multiplex PCR for simultaneous detection of thr
ee species of chlamydiae in human and avian specimens, The PCR was des
igned to increase sensitivity and to circumvent inhibitors of PCR pres
ent in clinical specimens. The target sequence was the 16S rRNA gene,
The first-step PCR was genus specific, and the second step PCR was mul
tiplexed (i.e., had multiple primer sets in the same tube) and could d
iscriminate among Chlamydia pneumoniae, Chlamydia psittaci, and Chlamy
dia trachomatis on the basis of the molecular weight of the amplicon.
The limit of detection of each of the two PCR steps was 5 inclusion-fo
rming units, We used PCR and serologic evidence during outbreaks of ps
ittacosis to infer that C. psittaci had been transmitted from birds pu
rchased in pet stores to humans, We also used this method to test both
live and dead birds from pet stores for infection with C. psittaci. C
ompared with culture, the application of PCR to avian specimens increa
sed the rate of C. psittaci detection.